CDS

Accession Number TCMCG016C10953
gbkey CDS
Protein Id OMO82859.1
Location join(18874..19039,19153..19304)
Organism Corchorus capsularis
locus_tag CCACVL1_11706

Protein

Length 105aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009945.1
Definition Glycoside hydrolase, family 16 [Corchorus capsularis]
Locus_tag CCACVL1_11706

EGGNOG-MAPPER Annotation

COG_category G
Description Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K08235        [VIEW IN KEGG]
EC 2.4.1.207        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016998        [VIEW IN EMBL-EBI]
GO:0033946        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0052736        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAATTTCCCTTAGCAATGCTCAGGGTCCACCTTCCCCTGGATTCTCCCCTAGTTCTAGGGCTAATTCTGTGAATTTTGATCAAGCTTATAGAAATCTATGGGGTCCTCAGCATCAAAGGGTAGACCAGGGTTCATTAACAATCTGGCTTGATAAAAGCTCAGGAAGTGGGTTCAAGTCACTTCGGTCTTACCAATCTGGTTACTTTGGTGCTGCCATGAAGCTCCATCCTGGTTACACTGCTGGAGTCATTACATCTTTCTATGTAAGAAACAGAAACATAAACAAGATTGAATTGTATAAGAACTTTGTTTGA
Protein:  
MIISLSNAQGPPSPGFSPSSRANSVNFDQAYRNLWGPQHQRVDQGSLTIWLDKSSGSGFKSLRSYQSGYFGAAMKLHPGYTAGVITSFYVRNRNINKIELYKNFV